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circrna mrna expression profile microarray  (Agilent technologies)


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    Structured Review

    Agilent technologies circrna mrna expression profile microarray
    Construction of <t>circRNA</t> associated ceRNA network. Green circle: upregulated circRNAs; red circle: downregulated circRNAs; blue circle: miRNAs; purple circle: upregulated mRNAs; deep blue circle: downregulated mRNAs.
    Circrna Mrna Expression Profile Microarray, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mrna+microarray+profiling/pmc07474783-51-2-1
    Average 90 stars, based on 1 article reviews
    circrna mrna expression profile microarray - by Bioz Stars, 2026-10
    90/100 stars

    Images

    1) Product Images from "Construction of circRNA-Associated ceRNA Network Reveals Novel Biomarkers for Esophageal Cancer"

    Article Title: Construction of circRNA-Associated ceRNA Network Reveals Novel Biomarkers for Esophageal Cancer

    Journal: Computational and Mathematical Methods in Medicine

    doi: 10.1155/2020/7958362

    Construction of circRNA associated ceRNA network. Green circle: upregulated circRNAs; red circle: downregulated circRNAs; blue circle: miRNAs; purple circle: upregulated mRNAs; deep blue circle: downregulated mRNAs.
    Figure Legend Snippet: Construction of circRNA associated ceRNA network. Green circle: upregulated circRNAs; red circle: downregulated circRNAs; blue circle: miRNAs; purple circle: upregulated mRNAs; deep blue circle: downregulated mRNAs.

    Techniques Used:

    Related Articles

    other:

    Article Title: Linc-NSC affects cell differentiation, apoptosis and proliferation in mouse neural stem cells and embryonic stem cells in vitro and in vivo
    Article Snippet: RNA expression profiling was then performed using the Agilent mouse lncRNA + mRNA microarray V2.0 platform.

    Article Title: LncRNA-MM2P Identified as a Modulator of Macrophage M2 Polarization
    Article Snippet: RNA expression profiling was performed using Agilent mouse lncRNA + mRNA microarray V2.0 platform.

    Article Title: LncRNA H19 initiates microglial pyroptosis and neuronal death in retinal ischemia/reperfusion injury
    Article Snippet: Microarray profiling was performed using the Agilent Mouse lncRNA+ mRNA Array V1.0 and the Agilent Mouse miRNA Microarray (Release 21.0, 8x60K).

    Gene Expression:

    Article Title: The regulatory effect of microRNA-21a-3p on the promotion of telocyte angiogenesis mediated by PI3K (p110α)/AKT/mTOR in LPS induced mice ARDS
    Article Snippet: .. Gene expression profiling analysis of both miRNA and mRNA were performed with Agilent Microarray Scanner (Cat # G2565CA, Agilent technologies, Santa Clara, CA). ..

    Microarray:

    Article Title: The regulatory effect of microRNA-21a-3p on the promotion of telocyte angiogenesis mediated by PI3K (p110α)/AKT/mTOR in LPS induced mice ARDS
    Article Snippet: .. Gene expression profiling analysis of both miRNA and mRNA were performed with Agilent Microarray Scanner (Cat # G2565CA, Agilent technologies, Santa Clara, CA). ..

    Article Title: Growth and Differentiation Factor 3 Induces Expression of Genes Related to Differentiation in a Model of Cancer Stem Cells and Protects Them from Retinoic Acid-Induced Apoptosis
    Article Snippet: To induce differentiation, NCCIT cells were treated with 10 μM all-trans retinoic acid (Sigma, Germany) for 14 days. .. For the transcriptome analysis human genome CGH Microarray 44K (Agilent Technologies, USA) was utilized according to manufactures protocol. .. In brief, the isolated RNA was labeled by Low RNA Input Fluorescent Linear Amplification kit (Agilent Technologies, USA), fragmented, mixed with control targets and hybridized overnight.

    Article Title: Targeted inhibition of mammalian target of rapamycin (mTOR) enhances radiosensitivity in pancreatic carcinoma cells
    Article Snippet: .. The samples were subjected to mRNA expression profiling on 4 × 44 K Agilent Whole Human Genome Microarray slides (catalog G4112F; Agilent Technologies Inc), using a single-color array method. .. Total RNA (200 ng) was labeled and amplified according to the manufacturer’s instructions, using a Low Input Quick Amp Labeling Kit (Agilent Technologies Inc).

    Article Title: A Pre-operative Nomogram for Prediction of Lymph Node Metastasis in Bladder Urothelial Carcinoma
    Article Snippet: The GEO cohort contains five LN+ and five LN– bladder tissues, of which RNA was extracted and hybridized on an Illumina Hiseq 2500 ( ). .. The MSKCC cohort contains 58 tumor samples with Agilent microarray mRNA expression profiling ( ). .. Survival information of the MSKCC cohort was obtained from the cBioPortal.

    Expressing:

    Article Title: Targeted inhibition of mammalian target of rapamycin (mTOR) enhances radiosensitivity in pancreatic carcinoma cells
    Article Snippet: .. The samples were subjected to mRNA expression profiling on 4 × 44 K Agilent Whole Human Genome Microarray slides (catalog G4112F; Agilent Technologies Inc), using a single-color array method. .. Total RNA (200 ng) was labeled and amplified according to the manufacturer’s instructions, using a Low Input Quick Amp Labeling Kit (Agilent Technologies Inc).

    Article Title: A Pre-operative Nomogram for Prediction of Lymph Node Metastasis in Bladder Urothelial Carcinoma
    Article Snippet: The GEO cohort contains five LN+ and five LN– bladder tissues, of which RNA was extracted and hybridized on an Illumina Hiseq 2500 ( ). .. The MSKCC cohort contains 58 tumor samples with Agilent microarray mRNA expression profiling ( ). .. Survival information of the MSKCC cohort was obtained from the cBioPortal.



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    Image Search Results


    Study design flowchart. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Study design flowchart. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of mRNAs for GSE103465. (A) Boxplot of GSE103465. (B) Volcano plots of DEmRNAs based on GSE103465. (C) Venn diagram of mRNAs for GeneCards and GSE103465, where the intersection section is predicted DEmRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of mRNAs for GSE103465. (A) Boxplot of GSE103465. (B) Volcano plots of DEmRNAs based on GSE103465. (C) Venn diagram of mRNAs for GeneCards and GSE103465, where the intersection section is predicted DEmRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of miRNAs for GSE121219. (A) Boxplot of GSE121219. (B) Volcano plots of DEmiRNAs based on GSE121219. (C) Venn diagram of miRNAs for miRDIP and GSE121219, where the intersection section is predicted DEmiRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of miRNAs for GSE121219. (A) Boxplot of GSE121219. (B) Volcano plots of DEmiRNAs based on GSE121219. (C) Venn diagram of miRNAs for miRDIP and GSE121219, where the intersection section is predicted DEmiRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of circRNAs for GSE147442. (A) Boxplot of GSE147442 after standardization. (B) Volcano plots of DEcircRNAs based on GSE147442. (C) Venn diagram of miRNAs for starBase 2.0 and GSE147442, where the intersection section is predicted DEcircRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of circRNAs for GSE147442. (A) Boxplot of GSE147442 after standardization. (B) Volcano plots of DEcircRNAs based on GSE147442. (C) Venn diagram of miRNAs for starBase 2.0 and GSE147442, where the intersection section is predicted DEcircRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Figure 5 CircRNA-miRNA-mRNA regulatory network, which consists of 8 DEcircRNAs, 10 DEmiRNAs and 45 DERNAs. DEcircRNA, differentially expressed circular RNA; DEmiRNA, differentially expressed micro RNA; DERNA, differentially expressed RNA. Arrow-shape nodes: circRNAs, triangle nodes: miRNAs, ellipse-shaped nodes: mRNAs

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Figure 5 CircRNA-miRNA-mRNA regulatory network, which consists of 8 DEcircRNAs, 10 DEmiRNAs and 45 DERNAs. DEcircRNA, differentially expressed circular RNA; DEmiRNA, differentially expressed micro RNA; DERNA, differentially expressed RNA. Arrow-shape nodes: circRNAs, triangle nodes: miRNAs, ellipse-shaped nodes: mRNAs

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    A PPI network and circRNA–miRNA–hub gene regulatory subnetwork. (A) A PPI network of the fifty-five target genes associated with angiogenesis in RIF. (B) Six hub genes extracted by cytoHubba plug-in. (C) CircRNA–miRNA–hub gene regulatory subnetwork, consisting of 3 circRNAs, 3 miRNAs, and 3 mRNAs. PPI, protein–protein interaction; circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: A PPI network and circRNA–miRNA–hub gene regulatory subnetwork. (A) A PPI network of the fifty-five target genes associated with angiogenesis in RIF. (B) Six hub genes extracted by cytoHubba plug-in. (C) CircRNA–miRNA–hub gene regulatory subnetwork, consisting of 3 circRNAs, 3 miRNAs, and 3 mRNAs. PPI, protein–protein interaction; circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

     microRNA  and gene expression  microarray  datasets related to idiopathic pulmonary fibrosis.

    Journal: Mediators of Inflammation

    Article Title: Analysis of Microarray-Identified Genes and MicroRNAs Associated with Idiopathic Pulmonary Fibrosis

    doi: 10.1155/2017/1804240

    Figure Lengend Snippet: microRNA and gene expression microarray datasets related to idiopathic pulmonary fibrosis.

    Article Snippet: Microarray data from IPF-related microRNA and mRNA expression profiles were retrieved and downloaded from the National Center for Biotechnology Information (NCBI) GEO database ( http://www.ncbi.nlmNih.gov/geo ).

    Techniques: Expressing, Microarray

    Construction of circRNA associated ceRNA network. Green circle: upregulated circRNAs; red circle: downregulated circRNAs; blue circle: miRNAs; purple circle: upregulated mRNAs; deep blue circle: downregulated mRNAs.

    Journal: Computational and Mathematical Methods in Medicine

    Article Title: Construction of circRNA-Associated ceRNA Network Reveals Novel Biomarkers for Esophageal Cancer

    doi: 10.1155/2020/7958362

    Figure Lengend Snippet: Construction of circRNA associated ceRNA network. Green circle: upregulated circRNAs; red circle: downregulated circRNAs; blue circle: miRNAs; purple circle: upregulated mRNAs; deep blue circle: downregulated mRNAs.

    Article Snippet: An Agilent circRNA and mRNA expression profile microarray was used to screen the differentially expressed circRNA and mRNA gene expression.

    Techniques: